No. words: 1307; after pruning: 1281


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 10.2 (1,1:554)  539  0.36 0.00 0.00  BE517709Td04P067E04P101F071F1_014.ab1        4   555 (142)  C BE517709Td04P067E04P101F071R1_014.ab1   (58)   552     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE517709Td04P067E04P101F071R1_014.ab1   610 
   70    BE517709Td04P067E04P101F071F1_014.ab1    15 
   74  C BE517709Td04P067E04P101F071R1_014.ab1   537 
   82    BE517709Td04P067E04P101F071F1_014.ab1    27 
   90  C BE517709Td04P067E04P101F071R1_014.ab1   521 
  159    BE517709Td04P067E04P101F071F1_014.ab1   104 
  187  C BE517709Td04P067E04P101F071R1_014.ab1   424 
  207    BE517709Td04P067E04P101F071F1_014.ab1   152 
  255  C BE517709Td04P067E04P101F071R1_014.ab1   356 
  259    BE517709Td04P067E04P101F071F1_014.ab1   204 
  336  C BE517709Td04P067E04P101F071R1_014.ab1   275 
  340    BE517709Td04P067E04P101F071F1_014.ab1   285 
  344  C BE517709Td04P067E04P101F071R1_014.ab1   267 
  360    BE517709Td04P067E04P101F071F1_014.ab1   305 
  380  C BE517709Td04P067E04P101F071R1_014.ab1   231 
  388    BE517709Td04P067E04P101F071F1_014.ab1   333 
  440  C BE517709Td04P067E04P101F071R1_014.ab1   171 
  444    BE517709Td04P067E04P101F071F1_014.ab1   389 
  480  C BE517709Td04P067E04P101F071R1_014.ab1   131 
  488    BE517709Td04P067E04P101F071F1_014.ab1   433 
  512  C BE517709Td04P067E04P101F071R1_014.ab1    99 
  516    BE517709Td04P067E04P101F071F1_014.ab1   461 
  520  C BE517709Td04P067E04P101F071R1_014.ab1    91 
  528    BE517709Td04P067E04P101F071F1_014.ab1   473 
  556  C BE517709Td04P067E04P101F071R1_014.ab1    55 
  564    BE517709Td04P067E04P101F071F1_014.ab1   509 
  572  C BE517709Td04P067E04P101F071R1_014.ab1    39 
  580    BE517709Td04P067E04P101F071F1_014.ab1   525 
Contig length: old 752, new 752

Contig length: old 752, new 752
New start: 0