No. words: 1231; after pruning: 1205


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 11.8 (1,1:575)  551  0.00 0.00 0.00  BE517709Td06P101C07P067E101F1_012.ab1       10   576 (48)  C BE517709Td06P101C07P067E101R1_012.ab1   (40)   567     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C BE517709Td06P101C07P067E101R1_012.ab1   607 
  172    BE517709Td06P101C07P067E101F1_012.ab1   141 
  180  C BE517709Td06P101C07P067E101R1_012.ab1   428 
  404    BE517709Td06P101C07P067E101F1_012.ab1   373 
  412  C BE517709Td06P101C07P067E101R1_012.ab1   196 
  488    BE517709Td06P101C07P067E101F1_012.ab1   457 
  496  C BE517709Td06P101C07P067E101R1_012.ab1   112 
  524    BE517709Td06P101C07P067E101F1_012.ab1   493 
  540  C BE517709Td06P101C07P067E101R1_012.ab1    68 
  548    BE517709Td06P101C07P067E101F1_012.ab1   517 
Contig length: old 655, new 655

Contig length: old 655, new 655
New start: 0