No. words: 1222; after pruning: 1196


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:562)  547  0.00 0.00 0.00  BE517709Td07P101C07P067E101F1_009.ab1        1   563 (52)  C BE517709Td07P101C07P067E101R1_009.ab1   (44)   563     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE517709Td07P101C07P067E101R1_009.ab1   607 
   68    BE517709Td07P101C07P067E101F1_009.ab1    24 
   72  C BE517709Td07P101C07P067E101R1_009.ab1   536 
  176    BE517709Td07P101C07P067E101F1_009.ab1   132 
  180  C BE517709Td07P101C07P067E101R1_009.ab1   428 
  220    BE517709Td07P101C07P067E101F1_009.ab1   176 
  232  C BE517709Td07P101C07P067E101R1_009.ab1   376 
  360    BE517709Td07P101C07P067E101F1_009.ab1   316 
  364  C BE517709Td07P101C07P067E101R1_009.ab1   244 
  448    BE517709Td07P101C07P067E101F1_009.ab1   404 
  456  C BE517709Td07P101C07P067E101R1_009.ab1   152 
  468    BE517709Td07P101C07P067E101F1_009.ab1   424 
  480  C BE517709Td07P101C07P067E101R1_009.ab1   128 
  488    BE517709Td07P101C07P067E101F1_009.ab1   444 
  496  C BE517709Td07P101C07P067E101R1_009.ab1   112 
  504    BE517709Td07P101C07P067E101F1_009.ab1   460 
  540  C BE517709Td07P101C07P067E101R1_009.ab1    68 
  548    BE517709Td07P101C07P067E101F1_009.ab1   504 
  560  C BE517709Td07P101C07P067E101R1_009.ab1    48 
  568    BE517709Td07P101C07P067E101F1_009.ab1   524 
  584  C BE517709Td07P101C07P067E101R1_009.ab1    24 
  588    BE517709Td07P101C07P067E101F1_009.ab1   544 
  592  C BE517709Td07P101C07P067E101R1_009.ab1    16 
  600    BE517709Td07P101C07P067E101F1_009.ab1   556 
Contig length: old 659, new 659

Contig length: old 659, new 659
New start: 0