No. words: 1807; after pruning: 1755


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    6    0.0 5.2 (1,1:292)  282  0.00 0.35 0.00  BE517719Ld03P067D04P067D101F1_080.ab1        8   293 (157)  C BE517719Ld03P067D04P067D101R1_080.ab1   (166)   287     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (2,1:292)  452  0.00 0.00 0.00  BE517719Ld03P067D04P067D101R1_080.ab1        1   453 (0)    BE517719Ld03P067D04P067D101R1_045.ab1        1   453 (14) *
Merge:(0)    0    0.0 9.7 (3,1:14)  434  0.00 0.00 0.00  BE517719Ld03P067D04P067D101F1_080.ab1       15   450 (0)    BE517719Ld03P067D04P067D101F1_045.ab1        1   436 (1) *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       4 
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  990 nodes

 227 str. conn. components

Path
    1  C BE517719Ld03P067D04P067D101R1_045.ab1   467 
   20  C BE517719Ld03P067D04P067D101R1_080.ab1   448 
  379    BE517719Ld03P067D04P067D101F1_045.ab1   191 
  607    BE517719Ld03P067D04P067D101F1_080.ab1   433 
  619    BE517719Ld03P067D04P067D101F1_045.ab1   431 
Contig length: old 625, new 625

Contig length: old 625, new 625
New start: 0