No. words: 1990; after pruning: 1922


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:1)  496  2.90 0.00 0.18  BE517780As01P067C04P067C101F1_059.ab1        2   553 (0)    BE517780As01P067C04P067C101F1_032.ab1        1   551 (16) *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (2,1:403)  388  0.00 0.25 0.25  BE517780As01P067C04P067C101F1_032.ab1        1   403 (164)  C BE517780As01P067C04P067C101R1_032.ab1   (41)   403     1 *
Merge:(0)    0    0.0 6.4 (3,1:385)  381  2.82 0.24 0.00  BE517780As01P067C04P067C101R1_032.ab1       20   444 (0)    BE517780As01P067C04P067C101R1_059.ab1        1   426 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       3 
  1       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  1024 nodes

 239 str. conn. components

Path
    1  C BE517780As01P067C04P067C101R1_032.ab1   444 
   37  C BE517780As01P067C04P067C101R1_059.ab1   390 
   41  C BE517780As01P067C04P067C101R1_032.ab1   404 
   57    BE517780As01P067C04P067C101F1_032.ab1    16 
   61  C BE517780As01P067C04P067C101R1_032.ab1   384 
   70    BE517780As01P067C04P067C101F1_032.ab1    28 
   73  C BE517780As01P067C04P067C101R1_032.ab1   372 
   78    BE517780As01P067C04P067C101F1_059.ab1    37 
   82  C BE517780As01P067C04P067C101R1_032.ab1   363 
   86    BE517780As01P067C04P067C101F1_032.ab1    44 
   94    BE517780As01P067C04P067C101F1_059.ab1    53 
   98    BE517780As01P067C04P067C101F1_032.ab1    56 
  174    BE517780As01P067C04P067C101F1_059.ab1   133 
  182  C BE517780As01P067C04P067C101R1_032.ab1   263 
  186    BE517780As01P067C04P067C101F1_032.ab1   144 
  236  C BE517780As01P067C04P067C101R1_032.ab1   209 
  248    BE517780As01P067C04P067C101F1_032.ab1   206 
  258  C BE517780As01P067C04P067C101R1_032.ab1   187 
  259    BE517780As01P067C04P067C101F1_032.ab1   217 
  267  C BE517780As01P067C04P067C101R1_032.ab1   178 
  283    BE517780As01P067C04P067C101F1_032.ab1   241 
  290  C BE517780As01P067C04P067C101R1_032.ab1   155 
  294    BE517780As01P067C04P067C101F1_032.ab1   252 
  298  C BE517780As01P067C04P067C101R1_032.ab1   147 
  319    BE517780As01P067C04P067C101F1_032.ab1   277 
  331  C BE517780As01P067C04P067C101R1_032.ab1   114 
  334    BE517780As01P067C04P067C101F1_032.ab1   292 
  339  C BE517780As01P067C04P067C101R1_032.ab1   106 
  342    BE517780As01P067C04P067C101F1_032.ab1   300 
  382  C BE517780As01P067C04P067C101R1_032.ab1    63 
  386    BE517780As01P067C04P067C101F1_032.ab1   344 
  400  C BE517780As01P067C04P067C101R1_032.ab1    45 
  404    BE517780As01P067C04P067C101F1_032.ab1   362 
  408  C BE517780As01P067C04P067C101R1_032.ab1    37 
  430    BE517780As01P067C04P067C101F1_032.ab1   388 
  507    BE517780As01P067C04P067C101F1_059.ab1   467 
  518    BE517780As01P067C04P067C101F1_032.ab1   476 
Contig length: old 608, new 609

Contig length: old 609, new 609
New start: 0