No. words: 1323; after pruning: 1297


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:708)  591  0.33 0.00 0.16  BE517914As02P067F04P067F101F1_069.ab1       19   633 (0)  C BE517914As02P067F04P067F101R1_069.ab1   (0)   690    77 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1    BE517914As02P067F04P067F101F1_069.ab1     1 
   87  C BE517914As02P067F04P067F101R1_069.ab1   623 
   98    BE517914As02P067F04P067F101F1_069.ab1    98 
  274  C BE517914As02P067F04P067F101R1_069.ab1   436 
  282    BE517914As02P067F04P067F101F1_069.ab1   282 
  294  C BE517914As02P067F04P067F101R1_069.ab1   416 
  338    BE517914As02P067F04P067F101F1_069.ab1   338 
  350  C BE517914As02P067F04P067F101R1_069.ab1   360 
  402    BE517914As02P067F04P067F101F1_069.ab1   402 
  422  C BE517914As02P067F04P067F101R1_069.ab1   288 
Contig length: old 709, new 709

Contig length: old 709, new 708
New start: 0 
D Change at: 48; seg lengths: entry 0, contig 1