No. words: 1376; after pruning: 1350


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:684)  635  0.15 0.74 0.00  BE517914Ld01P067F04P067F101F1_060.ab1        1   673 (0)  C BE517914Ld01P067F04P067F101R1_060.ab1   (17)   686     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BE517914Ld01P067F04P067F101R1_060.ab1   703 
   28    BE517914Ld01P067F04P067F101F1_060.ab1    10 
  160  C BE517914Ld01P067F04P067F101R1_060.ab1   544 
  164    BE517914Ld01P067F04P067F101F1_060.ab1   146 
  172  C BE517914Ld01P067F04P067F101R1_060.ab1   532 
  204    BE517914Ld01P067F04P067F101F1_060.ab1   186 
  208  C BE517914Ld01P067F04P067F101R1_060.ab1   496 
  220    BE517914Ld01P067F04P067F101F1_060.ab1   202 
  228  C BE517914Ld01P067F04P067F101R1_060.ab1   476 
  540    BE517914Ld01P067F04P067F101F1_060.ab1   522 
  544  C BE517914Ld01P067F04P067F101R1_060.ab1   160 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0