No. words: 1184; after pruning: 1158


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:687)  455  2.22 0.00 0.00  BE517914Ld10P067F04P067F101F1_044.ab1      142   637 (0)  C BE517914Ld10P067F04P067F101R1_044.ab1   (0)   547    52 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1    BE517914Ld10P067F04P067F101F1_044.ab1     1 
  189  C BE517914Ld10P067F04P067F101R1_044.ab1   500 
  193    BE517914Ld10P067F04P067F101F1_044.ab1   193 
  264  C BE517914Ld10P067F04P067F101R1_044.ab1   425 
  268    BE517914Ld10P067F04P067F101F1_044.ab1   268 
  400  C BE517914Ld10P067F04P067F101R1_044.ab1   289 
  404    BE517914Ld10P067F04P067F101F1_044.ab1   404 
  424  C BE517914Ld10P067F04P067F101R1_044.ab1   265 
  428    BE517914Ld10P067F04P067F101F1_044.ab1   428 
  511  C BE517914Ld10P067F04P067F101R1_044.ab1   178 
  515    BE517914Ld10P067F04P067F101F1_044.ab1   515 
  519  C BE517914Ld10P067F04P067F101R1_044.ab1   170 
  523    BE517914Ld10P067F04P067F101F1_044.ab1   523 
  552  C BE517914Ld10P067F04P067F101R1_044.ab1   137 
  556    BE517914Ld10P067F04P067F101F1_044.ab1   556 
  593  C BE517914Ld10P067F04P067F101R1_044.ab1    96 
  606    BE517914Ld10P067F04P067F101F1_044.ab1   606 
  610  C BE517914Ld10P067F04P067F101R1_044.ab1    79 
  614    BE517914Ld10P067F04P067F101F1_044.ab1   614 
  626  C BE517914Ld10P067F04P067F101R1_044.ab1    63 
Contig length: old 688, new 688

Contig length: old 688, new 688
New start: 0 
S Change at: 602; seg lengths: entry 1, contig 1