No. words: 1066; after pruning: 1040


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.9 (1,1:676)  373  0.52 0.00 0.00  BE517914Ld14P067F04P067F101F1_084.ab1        5   389 (4)  C BE517914Ld14P067F04P067F101R1_084.ab1   (0)   673   289 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1    BE517914Ld14P067F04P067F101F1_084.ab1     1 
  373  C BE517914Ld14P067F04P067F101R1_084.ab1   305 
Contig length: old 677, new 677

Contig length: old 677, new 677
New start: 0 
S Change at: 32; seg lengths: entry 1, contig 1