No. words: 1252; after pruning: 1226


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:520)  488  1.54 0.00 0.00  BE517914Sn25P067F04P108G051F1_055.ab1        1   521 (99)  C BE517914Sn25P067F04P108G051R1_055.ab1   (111)   521     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C BE517914Sn25P067F04P108G051R1_055.ab1   632 
  192    BE517914Sn25P067F04P108G051F1_055.ab1    81 
  200  C BE517914Sn25P067F04P108G051R1_055.ab1   433 
  230    BE517914Sn25P067F04P108G051F1_055.ab1   119 
  234  C BE517914Sn25P067F04P108G051R1_055.ab1   399 
  254    BE517914Sn25P067F04P108G051F1_055.ab1   143 
  258  C BE517914Sn25P067F04P108G051R1_055.ab1   375 
  334    BE517914Sn25P067F04P108G051F1_055.ab1   223 
  338  C BE517914Sn25P067F04P108G051R1_055.ab1   295 
  426    BE517914Sn25P067F04P108G051F1_055.ab1   315 
  430  C BE517914Sn25P067F04P108G051R1_055.ab1   203 
  438    BE517914Sn25P067F04P108G051F1_055.ab1   327 
  442  C BE517914Sn25P067F04P108G051R1_055.ab1   191 
  482    BE517914Sn25P067F04P108G051F1_055.ab1   371 
  486  C BE517914Sn25P067F04P108G051R1_055.ab1   147 
  490    BE517914Sn25P067F04P108G051F1_055.ab1   379 
  494  C BE517914Sn25P067F04P108G051R1_055.ab1   139 
  522    BE517914Sn25P067F04P108G051F1_055.ab1   411 
  530  C BE517914Sn25P067F04P108G051R1_055.ab1   103 
  534    BE517914Sn25P067F04P108G051F1_055.ab1   423 
  542  C BE517914Sn25P067F04P108G051R1_055.ab1    91 
  566    BE517914Sn25P067F04P108G051F1_055.ab1   455 
Contig length: old 731, new 731

Contig length: old 731, new 731
New start: 0