No. words: 1359; after pruning: 1333


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.9 (1,1:646)  623  0.16 0.00 0.16  BE517914Sn28P067F04P108G051F1_054.ab1        1   643 (38)  C BE517914Sn28P067F04P108G051R1_054.ab1   (32)   646     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BE517914Sn28P067F04P108G051R1_054.ab1   678 
  561    BE517914Sn28P067F04P108G051F1_054.ab1   529 
  565  C BE517914Sn28P067F04P108G051R1_054.ab1   114 
  569    BE517914Sn28P067F04P108G051F1_054.ab1   537 
  573  C BE517914Sn28P067F04P108G051R1_054.ab1   106 
  605    BE517914Sn28P067F04P108G051F1_054.ab1   573 
  609  C BE517914Sn28P067F04P108G051R1_054.ab1    70 
  613    BE517914Sn28P067F04P108G051F1_054.ab1   581 
  617  C BE517914Sn28P067F04P108G051R1_054.ab1    62 
  637    BE517914Sn28P067F04P108G051F1_054.ab1   605 
  645  C BE517914Sn28P067F04P108G051R1_054.ab1    34 
  649    BE517914Sn28P067F04P108G051F1_054.ab1   617 
Contig length: old 712, new 713

Contig length: old 713, new 713
New start: 0