No. words: 1290; after pruning: 1264


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:571)  534  1.40 0.00 0.17  BE517914Ta11P067F04P108G051F1_037.ab1        1   572 (51)  C BE517914Ta11P067F04P108G051R1_037.ab1   (96)   571     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BE517914Ta11P067F04P108G051R1_037.ab1   667 
  562    BE517914Ta11P067F04P108G051F1_037.ab1   466 
  566  C BE517914Ta11P067F04P108G051R1_037.ab1   102 
  622    BE517914Ta11P067F04P108G051F1_037.ab1   526 
  631  C BE517914Ta11P067F04P108G051R1_037.ab1    37 
  639    BE517914Ta11P067F04P108G051F1_037.ab1   543 
  643  C BE517914Ta11P067F04P108G051R1_037.ab1    25 
  647    BE517914Ta11P067F04P108G051F1_037.ab1   551 
Contig length: old 718, new 719

Contig length: old 719, new 719
New start: 0