No. words: 1298; after pruning: 1272


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:568)  529  1.58 0.18 0.00  BE517914Ta16P067F04P108G051F1_034.ab1        1   569 (61)  C BE517914Ta16P067F04P108G051R1_034.ab1   (98)   570     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE517914Ta16P067F04P108G051R1_034.ab1   668 
  561    BE517914Ta16P067F04P108G051F1_034.ab1   462 
  565  C BE517914Ta16P067F04P108G051R1_034.ab1   104 
  569    BE517914Ta16P067F04P108G051F1_034.ab1   470 
  573  C BE517914Ta16P067F04P108G051R1_034.ab1    96 
  617    BE517914Ta16P067F04P108G051F1_034.ab1   518 
  633  C BE517914Ta16P067F04P108G051R1_034.ab1    36 
  637    BE517914Ta16P067F04P108G051F1_034.ab1   538 
Contig length: old 729, new 729

Contig length: old 729, new 729
New start: 0