No. words: 1343; after pruning: 1317


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:626)  609  0.00 0.00 0.16  BE517914Ta18P067F04P108G051F1_064.ab1        1   627 (49)  C BE517914Ta18P067F04P108G051R1_064.ab1   (41)   626     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE517914Ta18P067F04P108G051R1_064.ab1   667 
   57    BE517914Ta18P067F04P108G051F1_064.ab1    16 
   65  C BE517914Ta18P067F04P108G051R1_064.ab1   603 
   73    BE517914Ta18P067F04P108G051F1_064.ab1    32 
   93  C BE517914Ta18P067F04P108G051R1_064.ab1   575 
  561    BE517914Ta18P067F04P108G051F1_064.ab1   520 
  565  C BE517914Ta18P067F04P108G051R1_064.ab1   103 
  569    BE517914Ta18P067F04P108G051F1_064.ab1   528 
  573  C BE517914Ta18P067F04P108G051R1_064.ab1    95 
  585    BE517914Ta18P067F04P108G051F1_064.ab1   544 
  593  C BE517914Ta18P067F04P108G051R1_064.ab1    75 
  597    BE517914Ta18P067F04P108G051F1_064.ab1   556 
  601  C BE517914Ta18P067F04P108G051R1_064.ab1    67 
  609    BE517914Ta18P067F04P108G051F1_064.ab1   568 
  625  C BE517914Ta18P067F04P108G051R1_064.ab1    43 
  641    BE517914Ta18P067F04P108G051F1_064.ab1   600 
  645  C BE517914Ta18P067F04P108G051R1_064.ab1    23 
  649    BE517914Ta18P067F04P108G051F1_064.ab1   608 
Contig length: old 716, new 717

Contig length: old 717, new 717
New start: 0