No. words: 1218; after pruning: 1192


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:500)  492  0.00 0.00 0.00  BE517914Ta21P067F04P108G051F1_059.ab1        1   501 (107)  C BE517914Ta21P067F04P108G051R1_059.ab1   (109)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE517914Ta21P067F04P108G051R1_059.ab1   610 
  497    BE517914Ta21P067F04P108G051F1_059.ab1   388 
  501  C BE517914Ta21P067F04P108G051R1_059.ab1   110 
  525    BE517914Ta21P067F04P108G051F1_059.ab1   416 
  529  C BE517914Ta21P067F04P108G051R1_059.ab1    82 
  565    BE517914Ta21P067F04P108G051F1_059.ab1   456 
  573  C BE517914Ta21P067F04P108G051R1_059.ab1    38 
  577    BE517914Ta21P067F04P108G051F1_059.ab1   468 
  585  C BE517914Ta21P067F04P108G051R1_059.ab1    26 
  589    BE517914Ta21P067F04P108G051F1_059.ab1   480 
  593  C BE517914Ta21P067F04P108G051R1_059.ab1    18 
  597    BE517914Ta21P067F04P108G051F1_059.ab1   488 
Contig length: old 717, new 717

Contig length: old 717, new 717
New start: 0