No. words: 1343; after pruning: 1317


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:626)  614  0.00 0.00 0.00  BE517914Ta23P067F04P108G051F1_057.ab1        1   627 (49)  C BE517914Ta23P067F04P108G051R1_057.ab1   (40)   627     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BE517914Ta23P067F04P108G051R1_057.ab1   667 
   76    BE517914Ta23P067F04P108G051F1_057.ab1    36 
   92  C BE517914Ta23P067F04P108G051R1_057.ab1   576 
  560    BE517914Ta23P067F04P108G051F1_057.ab1   520 
  564  C BE517914Ta23P067F04P108G051R1_057.ab1   104 
  608    BE517914Ta23P067F04P108G051F1_057.ab1   568 
  612  C BE517914Ta23P067F04P108G051R1_057.ab1    56 
  624    BE517914Ta23P067F04P108G051F1_057.ab1   584 
  632  C BE517914Ta23P067F04P108G051R1_057.ab1    36 
  636    BE517914Ta23P067F04P108G051F1_057.ab1   596 
Contig length: old 716, new 716

Contig length: old 716, new 716
New start: 0