No. words: 1355; after pruning: 1329


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:639)  618  0.00 0.16 0.16  BE517914Td01P067F04P108G051F1_047.ab1        1   640 (32)  C BE517914Td01P067F04P108G051R1_047.ab1   (43)   640     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BE517914Td01P067F04P108G051R1_047.ab1   683 
   79    BE517914Td01P067F04P108G051F1_047.ab1    35 
   87  C BE517914Td01P067F04P108G051R1_047.ab1   597 
   91    BE517914Td01P067F04P108G051F1_047.ab1    47 
   95  C BE517914Td01P067F04P108G051R1_047.ab1   589 
  103    BE517914Td01P067F04P108G051F1_047.ab1    59 
  111  C BE517914Td01P067F04P108G051R1_047.ab1   573 
  139    BE517914Td01P067F04P108G051F1_047.ab1    95 
  315  C BE517914Td01P067F04P108G051R1_047.ab1   369 
  323    BE517914Td01P067F04P108G051F1_047.ab1   279 
  343  C BE517914Td01P067F04P108G051R1_047.ab1   341 
  355    BE517914Td01P067F04P108G051F1_047.ab1   311 
  427  C BE517914Td01P067F04P108G051R1_047.ab1   257 
  439    BE517914Td01P067F04P108G051F1_047.ab1   395 
  451  C BE517914Td01P067F04P108G051R1_047.ab1   233 
  519    BE517914Td01P067F04P108G051F1_047.ab1   475 
  531  C BE517914Td01P067F04P108G051R1_047.ab1   153 
  563    BE517914Td01P067F04P108G051F1_047.ab1   519 
  571  C BE517914Td01P067F04P108G051R1_047.ab1   113 
  579    BE517914Td01P067F04P108G051F1_047.ab1   535 
  591  C BE517914Td01P067F04P108G051R1_047.ab1    93 
  607    BE517914Td01P067F04P108G051F1_047.ab1   563 
Contig length: old 715, new 716

Contig length: old 716, new 716
New start: 0