No. words: 1321; after pruning: 1295


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:610)  594  0.00 0.00 0.16  BE517914Td09P067F04P108G051F1_039.ab1        1   611 (50)  C BE517914Td09P067F04P108G051R1_039.ab1   (50)   610     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE517914Td09P067F04P108G051R1_039.ab1   660 
  238    BE517914Td09P067F04P108G051F1_039.ab1   188 
  242  C BE517914Td09P067F04P108G051R1_039.ab1   419 
  246    BE517914Td09P067F04P108G051F1_039.ab1   196 
  270  C BE517914Td09P067F04P108G051R1_039.ab1   391 
  350    BE517914Td09P067F04P108G051F1_039.ab1   300 
  442  C BE517914Td09P067F04P108G051R1_039.ab1   219 
  514    BE517914Td09P067F04P108G051F1_039.ab1   464 
  526  C BE517914Td09P067F04P108G051R1_039.ab1   135 
  558    BE517914Td09P067F04P108G051F1_039.ab1   508 
  574  C BE517914Td09P067F04P108G051R1_039.ab1    87 
  590    BE517914Td09P067F04P108G051F1_039.ab1   540 
  594  C BE517914Td09P067F04P108G051R1_039.ab1    67 
  606    BE517914Td09P067F04P108G051F1_039.ab1   556 
Contig length: old 710, new 711

Contig length: old 711, new 711
New start: 0