No. words: 1343; after pruning: 1317


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:629)  613  0.00 0.16 0.00  BE517914Td10P067F04P108G051F1_040.ab1        1   630 (41)  C BE517914Td10P067F04P108G051R1_040.ab1   (41)   631     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE517914Td10P067F04P108G051R1_040.ab1   672 
   90    BE517914Td10P067F04P108G051F1_040.ab1    48 
   94  C BE517914Td10P067F04P108G051R1_040.ab1   579 
  102    BE517914Td10P067F04P108G051F1_040.ab1    60 
  110  C BE517914Td10P067F04P108G051R1_040.ab1   563 
  126    BE517914Td10P067F04P108G051F1_040.ab1    84 
  242  C BE517914Td10P067F04P108G051R1_040.ab1   431 
  250    BE517914Td10P067F04P108G051F1_040.ab1   208 
  426  C BE517914Td10P067F04P108G051R1_040.ab1   247 
  522    BE517914Td10P067F04P108G051F1_040.ab1   480 
  530  C BE517914Td10P067F04P108G051R1_040.ab1   143 
  562    BE517914Td10P067F04P108G051F1_040.ab1   520 
  586  C BE517914Td10P067F04P108G051R1_040.ab1    87 
  606    BE517914Td10P067F04P108G051F1_040.ab1   564 
Contig length: old 713, new 713

Contig length: old 713, new 713
New start: 0