No. words: 1596; after pruning: 1570


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.0 (1,1:1481)   92  1.72 0.00 2.59  BE517923Tu02P026A09P026E111F1_088.ab1      620   735 (0)  C BE517923Tu02P026A09P026E111R1_088.ab1   (0)   861   749 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  46 nodes

 25 str. conn. components

Path
    1    BE517923Tu02P026A09P026E111F1_088.ab1     1 
  630  C BE517923Tu02P026A09P026E111R1_088.ab1   852 
  685    BE517923Tu02P026A09P026E111F1_088.ab1   687 
  689  C BE517923Tu02P026A09P026E111R1_088.ab1   793 
Contig length: old 1482, new 1481

Contig length: old 1481, new 1482
New start: 0 
I Change at: 685; seg lengths: entry 1, contig 0