No. words: 219; after pruning: 193


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    7   -1.9 -1.9 (1,1:54)   38  2.08 2.08 0.00  BE517931Ta13P026G01P016B121F1_008.ab1        1    48 (65)  C BE517931Ta13P026G01P016B121R1_008.ab1   (50)    56     8 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.9       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  20 nodes

 12 str. conn. components

Path
    1  C BE517931Ta13P026G01P016B121R1_008.ab1   106 
   82    BE517931Ta13P026G01P016B121F1_008.ab1    31 
Contig length: old 164, new 164

Contig length: old 164, new 164
New start: 0 
S Change at: 95; seg lengths: entry 1, contig 1