No. words: 985; after pruning: 959


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.1 (1,1:815)  158  0.00 0.60 0.00  BE518003At01P067G04P067G101F1_072.ab1      367   534 (0)  C BE518003At01P067G04P067G101R1_072.ab1   (0)   451   283 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1    BE518003At01P067G04P067G101F1_072.ab1     1 
  430  C BE518003At01P067G04P067G101R1_072.ab1   388 
Contig length: old 816, new 817

Contig length: old 817, new 817
New start: 0