No. words: 1086; after pruning: 1047


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 5.1 (1,1:5)  276  2.31 0.00 0.00  BE518003Ld01P067G04P067G101R1_088.ab1        6   308 (204)    BE518003Ld01P067G04P067G101R1_044.ab1        1   303 (2) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1    BE518003Ld01P067G04P067G101R1_088.ab1     1 
   29    BE518003Ld01P067G04P067G101R1_044.ab1    24 
   61    BE518003Ld01P067G04P067G101R1_088.ab1    61 
   73    BE518003Ld01P067G04P067G101R1_044.ab1    68 
   81    BE518003Ld01P067G04P067G101R1_088.ab1    81 
   89    BE518003Ld01P067G04P067G101R1_044.ab1    84 
   97    BE518003Ld01P067G04P067G101R1_088.ab1    97 
Contig length: old 512, new 512

Contig length: old 512, new 512
New start: 0 
S Change at: 46; seg lengths: entry 1, contig 1