No. words: 1074; after pruning: 1048


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.5 (1,1:779)  285  0.00 0.00 0.00  BE518003Ld09P067G04P067G101F1_008.ab1      264   557 (0)  C BE518003Ld09P067G04P067G101R1_008.ab1   (0)   517   224 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  148 nodes

 76 str. conn. components

Path
    1    BE518003Ld09P067G04P067G101F1_008.ab1     1 
  367  C BE518003Ld09P067G04P067G101R1_008.ab1   414 
  375    BE518003Ld09P067G04P067G101F1_008.ab1   375 
  391  C BE518003Ld09P067G04P067G101R1_008.ab1   390 
  395    BE518003Ld09P067G04P067G101F1_008.ab1   395 
  407  C BE518003Ld09P067G04P067G101R1_008.ab1   374 
  419    BE518003Ld09P067G04P067G101F1_008.ab1   419 
  423  C BE518003Ld09P067G04P067G101R1_008.ab1   358 
  439    BE518003Ld09P067G04P067G101F1_008.ab1   439 
  443  C BE518003Ld09P067G04P067G101R1_008.ab1   338 
  495    BE518003Ld09P067G04P067G101F1_008.ab1   495 
  499  C BE518003Ld09P067G04P067G101R1_008.ab1   282 
  535    BE518003Ld09P067G04P067G101F1_008.ab1   535 
  547  C BE518003Ld09P067G04P067G101R1_008.ab1   234 
Contig length: old 780, new 780

Contig length: old 780, new 780
New start: 0