No. words: 1302; after pruning: 1276


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.8 (1,1:607)  592  0.00 0.00 0.17  BE518003Sn26P067G04P101E081F1_056.ab1        1   606 (44)  C BE518003Sn26P067G04P101E081R1_056.ab1   (45)   607     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BE518003Sn26P067G04P101E081R1_056.ab1   652 
   69    BE518003Sn26P067G04P101E081F1_056.ab1    24 
   77  C BE518003Sn26P067G04P101E081R1_056.ab1   576 
   93    BE518003Sn26P067G04P101E081F1_056.ab1    48 
  101  C BE518003Sn26P067G04P101E081R1_056.ab1   552 
  125    BE518003Sn26P067G04P101E081F1_056.ab1    80 
  129  C BE518003Sn26P067G04P101E081R1_056.ab1   524 
  133    BE518003Sn26P067G04P101E081F1_056.ab1    88 
  145  C BE518003Sn26P067G04P101E081R1_056.ab1   508 
  149    BE518003Sn26P067G04P101E081F1_056.ab1   104 
  153  C BE518003Sn26P067G04P101E081R1_056.ab1   500 
  161    BE518003Sn26P067G04P101E081F1_056.ab1   116 
  165  C BE518003Sn26P067G04P101E081R1_056.ab1   488 
  177    BE518003Sn26P067G04P101E081F1_056.ab1   132 
  189  C BE518003Sn26P067G04P101E081R1_056.ab1   464 
  197    BE518003Sn26P067G04P101E081F1_056.ab1   152 
  213  C BE518003Sn26P067G04P101E081R1_056.ab1   440 
  221    BE518003Sn26P067G04P101E081F1_056.ab1   176 
  313  C BE518003Sn26P067G04P101E081R1_056.ab1   340 
  325    BE518003Sn26P067G04P101E081F1_056.ab1   280 
  381  C BE518003Sn26P067G04P101E081R1_056.ab1   272 
  393    BE518003Sn26P067G04P101E081F1_056.ab1   348 
  457  C BE518003Sn26P067G04P101E081R1_056.ab1   196 
  465    BE518003Sn26P067G04P101E081F1_056.ab1   420 
  549  C BE518003Sn26P067G04P101E081R1_056.ab1   104 
  561    BE518003Sn26P067G04P101E081F1_056.ab1   516 
Contig length: old 694, new 695

Contig length: old 695, new 695
New start: 0