No. words: 1201; after pruning: 1175


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.3 (1,1:556)  544  0.00 0.00 0.00  BE518003Sn26P067G04P108H051F1_088.ab1        1   556 (52)  C BE518003Sn26P067G04P108H051R1_088.ab1   (36)   557     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE518003Sn26P067G04P108H051R1_088.ab1   593 
   60    BE518003Sn26P067G04P108H051F1_088.ab1    24 
   76  C BE518003Sn26P067G04P108H051R1_088.ab1   518 
  480    BE518003Sn26P067G04P108H051F1_088.ab1   444 
Contig length: old 644, new 644

Contig length: old 644, new 644
New start: 0