No. words: 1180; after pruning: 1154


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 0.2 (1,1:510)  387  6.47 0.20 0.59  BE518003Sn27P067G04P101E081F2_021.ab1        1   510 (21)  C BE518003Sn27P067G04P101E081R2_021.ab1   (139)   510     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  150 nodes

 77 str. conn. components

Path
    1  C BE518003Sn27P067G04P101E081R2_021.ab1   649 
  212    BE518003Sn27P067G04P101E081F2_021.ab1    73 
  216  C BE518003Sn27P067G04P101E081R2_021.ab1   434 
  244    BE518003Sn27P067G04P101E081F2_021.ab1   105 
  255  C BE518003Sn27P067G04P101E081R2_021.ab1   395 
  425    BE518003Sn27P067G04P101E081F2_021.ab1   286 
  429  C BE518003Sn27P067G04P101E081R2_021.ab1   221 
  513    BE518003Sn27P067G04P101E081F2_021.ab1   374 
  524  C BE518003Sn27P067G04P101E081R2_021.ab1   126 
  642    BE518003Sn27P067G04P101E081F2_021.ab1   505 
Contig length: old 669, new 668

Contig length: old 668, new 668
New start: 0 
S Change at: 405; seg lengths: entry 1, contig 1