No. words: 1287; after pruning: 1261


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.4 (1,1:607)  596  0.00 0.00 0.00  BE518003Sn28P067G04P101E081F1_054.ab1        1   606 (31)  C BE518003Sn28P067G04P101E081R1_054.ab1   (42)   608     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE518003Sn28P067G04P101E081R1_054.ab1   650 
   66    BE518003Sn28P067G04P101E081F1_054.ab1    24 
   74  C BE518003Sn28P067G04P101E081R1_054.ab1   577 
   78    BE518003Sn28P067G04P101E081F1_054.ab1    36 
   82  C BE518003Sn28P067G04P101E081R1_054.ab1   569 
   90    BE518003Sn28P067G04P101E081F1_054.ab1    48 
   94  C BE518003Sn28P067G04P101E081R1_054.ab1   557 
  122    BE518003Sn28P067G04P101E081F1_054.ab1    80 
  126  C BE518003Sn28P067G04P101E081R1_054.ab1   525 
  130    BE518003Sn28P067G04P101E081F1_054.ab1    88 
  142  C BE518003Sn28P067G04P101E081R1_054.ab1   509 
  146    BE518003Sn28P067G04P101E081F1_054.ab1   104 
  166  C BE518003Sn28P067G04P101E081R1_054.ab1   485 
  174    BE518003Sn28P067G04P101E081F1_054.ab1   132 
  186  C BE518003Sn28P067G04P101E081R1_054.ab1   465 
  194    BE518003Sn28P067G04P101E081F1_054.ab1   152 
  210  C BE518003Sn28P067G04P101E081R1_054.ab1   441 
  218    BE518003Sn28P067G04P101E081F1_054.ab1   176 
  382  C BE518003Sn28P067G04P101E081R1_054.ab1   269 
  390    BE518003Sn28P067G04P101E081F1_054.ab1   348 
  554  C BE518003Sn28P067G04P101E081R1_054.ab1    97 
  562    BE518003Sn28P067G04P101E081F1_054.ab1   520 
Contig length: old 679, new 679

Contig length: old 679, new 679
New start: 0