No. words: 1344; after pruning: 1318


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 5.7 (1,1:634)  497  6.17 0.00 0.32  BE518003Sn29P101C08P067G101F1_083.ab1        1   632 (26)  C BE518003Sn29P101C08P067G101R1_083.ab1   (52)   634     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1  C BE518003Sn29P101C08P067G101R1_083.ab1   686 
   79    BE518003Sn29P101C08P067G101F1_083.ab1    27 
  137  C BE518003Sn29P101C08P067G101R1_083.ab1   550 
  145    BE518003Sn29P101C08P067G101F1_083.ab1    93 
  157  C BE518003Sn29P101C08P067G101R1_083.ab1   530 
  161    BE518003Sn29P101C08P067G101F1_083.ab1   109 
  180  C BE518003Sn29P101C08P067G101R1_083.ab1   508 
  203    BE518003Sn29P101C08P067G101F1_083.ab1   151 
  219  C BE518003Sn29P101C08P067G101R1_083.ab1   469 
  245    BE518003Sn29P101C08P067G101F1_083.ab1   193 
  261  C BE518003Sn29P101C08P067G101R1_083.ab1   427 
  269    BE518003Sn29P101C08P067G101F1_083.ab1   217 
  336  C BE518003Sn29P101C08P067G101R1_083.ab1   352 
  372    BE518003Sn29P101C08P067G101F1_083.ab1   320 
  380  C BE518003Sn29P101C08P067G101R1_083.ab1   308 
  396    BE518003Sn29P101C08P067G101F1_083.ab1   344 
  404  C BE518003Sn29P101C08P067G101R1_083.ab1   284 
  416    BE518003Sn29P101C08P067G101F1_083.ab1   364 
  420  C BE518003Sn29P101C08P067G101R1_083.ab1   268 
  424    BE518003Sn29P101C08P067G101F1_083.ab1   372 
  445  C BE518003Sn29P101C08P067G101R1_083.ab1   243 
  458    BE518003Sn29P101C08P067G101F1_083.ab1   406 
  462  C BE518003Sn29P101C08P067G101R1_083.ab1   226 
  470    BE518003Sn29P101C08P067G101F1_083.ab1   418 
  482  C BE518003Sn29P101C08P067G101R1_083.ab1   206 
  503    BE518003Sn29P101C08P067G101F1_083.ab1   451 
  549  C BE518003Sn29P101C08P067G101R1_083.ab1   139 
  606    BE518003Sn29P101C08P067G101F1_083.ab1   554 
  610  C BE518003Sn29P101C08P067G101R1_083.ab1    78 
  618    BE518003Sn29P101C08P067G101F1_083.ab1   566 
  626  C BE518003Sn29P101C08P067G101R1_083.ab1    62 
  665    BE518003Sn29P101C08P067G101F1_083.ab1   613 
Contig length: old 709, new 710

Contig length: old 710, new 710
New start: 0 
S Change at: 129; seg lengths: entry 1, contig 1
S Change at: 185; seg lengths: entry 4, contig 4
S Change at: 215; seg lengths: entry 1, contig 1
S Change at: 328; seg lengths: entry 1, contig 1
S Change at: 388; seg lengths: entry 1, contig 1
S Change at: 670; seg lengths: entry 4, contig 4