No. words: 1234; after pruning: 1208


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:555)  526  0.72 0.00 0.18  BE518003Sn30P101D08P067G101F1_053.ab1        1   556 (51)  C BE518003Sn30P101D08P067G101R1_053.ab1   (72)   555     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C BE518003Sn30P101D08P067G101R1_053.ab1   627 
  520    BE518003Sn30P101D08P067G101F1_053.ab1   448 
  528  C BE518003Sn30P101D08P067G101R1_053.ab1   100 
  532    BE518003Sn30P101D08P067G101F1_053.ab1   460 
  544  C BE518003Sn30P101D08P067G101R1_053.ab1    84 
  556    BE518003Sn30P101D08P067G101F1_053.ab1   484 
  564  C BE518003Sn30P101D08P067G101R1_053.ab1    64 
  568    BE518003Sn30P101D08P067G101F1_053.ab1   496 
  572  C BE518003Sn30P101D08P067G101R1_053.ab1    56 
  576    BE518003Sn30P101D08P067G101F1_053.ab1   504 
Contig length: old 678, new 679

Contig length: old 679, new 679
New start: 0