No. words: 1260; after pruning: 1234


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.2 (1,1:589)  541  1.36 0.00 0.51  BE518003Ta11P067G04P101E081F2_005.ab1        1   589 (24)  C BE518003Ta11P067G04P101E081R2_005.ab1   (59)   588     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BE518003Ta11P067G04P101E081R2_005.ab1   647 
   90    BE518003Ta11P067G04P101E081F2_005.ab1    31 
   98  C BE518003Ta11P067G04P101E081R2_005.ab1   550 
  149    BE518003Ta11P067G04P101E081F2_005.ab1    91 
  153  C BE518003Ta11P067G04P101E081R2_005.ab1   495 
  157    BE518003Ta11P067G04P101E081F2_005.ab1    99 
  161  C BE518003Ta11P067G04P101E081R2_005.ab1   487 
  194    BE518003Ta11P067G04P101E081F2_005.ab1   136 
  198  C BE518003Ta11P067G04P101E081R2_005.ab1   450 
  210    BE518003Ta11P067G04P101E081F2_005.ab1   152 
  214  C BE518003Ta11P067G04P101E081R2_005.ab1   434 
  230    BE518003Ta11P067G04P101E081F2_005.ab1   172 
  234  C BE518003Ta11P067G04P101E081R2_005.ab1   414 
  238    BE518003Ta11P067G04P101E081F2_005.ab1   180 
  242  C BE518003Ta11P067G04P101E081R2_005.ab1   406 
  246    BE518003Ta11P067G04P101E081F2_005.ab1   188 
  254  C BE518003Ta11P067G04P101E081R2_005.ab1   394 
  258    BE518003Ta11P067G04P101E081F2_005.ab1   200 
  266  C BE518003Ta11P067G04P101E081R2_005.ab1   382 
  286    BE518003Ta11P067G04P101E081F2_005.ab1   228 
  294  C BE518003Ta11P067G04P101E081R2_005.ab1   354 
  306    BE518003Ta11P067G04P101E081F2_005.ab1   248 
  310  C BE518003Ta11P067G04P101E081R2_005.ab1   338 
  326    BE518003Ta11P067G04P101E081F2_005.ab1   268 
  330  C BE518003Ta11P067G04P101E081R2_005.ab1   318 
  424    BE518003Ta11P067G04P101E081F2_005.ab1   366 
  428  C BE518003Ta11P067G04P101E081R2_005.ab1   220 
  443    BE518003Ta11P067G04P101E081F2_005.ab1   385 
  447  C BE518003Ta11P067G04P101E081R2_005.ab1   201 
  640    BE518003Ta11P067G04P101E081F2_005.ab1   584 
Contig length: old 670, new 669

Contig length: old 669, new 669
New start: 0