No. words: 1216; after pruning: 1190


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 10.1 (1,1:556)  530  0.36 0.00 0.18  BE518003Ta11P067G04P108H051F1_069.ab1        1   554 (52)  C BE518003Ta11P067G04P108H051R1_069.ab1   (54)   556     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BE518003Ta11P067G04P108H051R1_069.ab1   610 
  345    BE518003Ta11P067G04P108H051F1_069.ab1   291 
  481  C BE518003Ta11P067G04P108H051R1_069.ab1   130 
  497    BE518003Ta11P067G04P108H051F1_069.ab1   443 
Contig length: old 659, new 660

Contig length: old 660, new 660
New start: 0