No. words: 1253; after pruning: 1227


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:582)  540  1.37 0.00 0.34  BE518003Ta13P067G04P101E081F2_003.ab1        1   583 (25)  C BE518003Ta13P067G04P101E081R2_003.ab1   (64)   581     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BE518003Ta13P067G04P101E081R2_003.ab1   645 
   90    BE518003Ta13P067G04P101E081F2_003.ab1    26 
   98  C BE518003Ta13P067G04P101E081R2_003.ab1   548 
  110    BE518003Ta13P067G04P101E081F2_003.ab1    46 
  114  C BE518003Ta13P067G04P101E081R2_003.ab1   532 
  157    BE518003Ta13P067G04P101E081F2_003.ab1    94 
  161  C BE518003Ta13P067G04P101E081R2_003.ab1   485 
  194    BE518003Ta13P067G04P101E081F2_003.ab1   131 
  198  C BE518003Ta13P067G04P101E081R2_003.ab1   448 
  210    BE518003Ta13P067G04P101E081F2_003.ab1   147 
  214  C BE518003Ta13P067G04P101E081R2_003.ab1   432 
  230    BE518003Ta13P067G04P101E081F2_003.ab1   167 
  242  C BE518003Ta13P067G04P101E081R2_003.ab1   404 
  246    BE518003Ta13P067G04P101E081F2_003.ab1   183 
  254  C BE518003Ta13P067G04P101E081R2_003.ab1   392 
  258    BE518003Ta13P067G04P101E081F2_003.ab1   195 
  266  C BE518003Ta13P067G04P101E081R2_003.ab1   380 
  286    BE518003Ta13P067G04P101E081F2_003.ab1   223 
  294  C BE518003Ta13P067G04P101E081R2_003.ab1   352 
  306    BE518003Ta13P067G04P101E081F2_003.ab1   243 
  310  C BE518003Ta13P067G04P101E081R2_003.ab1   336 
  326    BE518003Ta13P067G04P101E081F2_003.ab1   263 
  330  C BE518003Ta13P067G04P101E081R2_003.ab1   316 
  424    BE518003Ta13P067G04P101E081F2_003.ab1   361 
  428  C BE518003Ta13P067G04P101E081R2_003.ab1   218 
  443    BE518003Ta13P067G04P101E081F2_003.ab1   380 
  447  C BE518003Ta13P067G04P101E081R2_003.ab1   199 
  498    BE518003Ta13P067G04P101E081F2_003.ab1   435 
  502  C BE518003Ta13P067G04P101E081R2_003.ab1   144 
  641    BE518003Ta13P067G04P101E081F2_003.ab1   579 
Contig length: old 670, new 670

Contig length: old 670, new 670
New start: 0