No. words: 1346; after pruning: 1320


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:639)  525  5.01 0.31 0.00  BE518003Ta13P101C08P067G101F1_067.ab1        1   639 (18)  C BE518003Ta13P101C08P067G101R1_067.ab1   (48)   641     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BE518003Ta13P101C08P067G101R1_067.ab1   689 
   62    BE518003Ta13P101C08P067G101F1_067.ab1    13 
   77  C BE518003Ta13P101C08P067G101R1_067.ab1   612 
   81    BE518003Ta13P101C08P067G101F1_067.ab1    32 
   85  C BE518003Ta13P101C08P067G101R1_067.ab1   604 
   93    BE518003Ta13P101C08P067G101F1_067.ab1    44 
  135  C BE518003Ta13P101C08P067G101R1_067.ab1   554 
  143    BE518003Ta13P101C08P067G101F1_067.ab1    94 
  151  C BE518003Ta13P101C08P067G101R1_067.ab1   538 
  163    BE518003Ta13P101C08P067G101F1_067.ab1   114 
  173  C BE518003Ta13P101C08P067G101R1_067.ab1   516 
  181    BE518003Ta13P101C08P067G101F1_067.ab1   132 
  185  C BE518003Ta13P101C08P067G101R1_067.ab1   504 
  204    BE518003Ta13P101C08P067G101F1_067.ab1   155 
  208  C BE518003Ta13P101C08P067G101R1_067.ab1   481 
  212    BE518003Ta13P101C08P067G101F1_067.ab1   163 
  216  C BE518003Ta13P101C08P067G101R1_067.ab1   473 
  244    BE518003Ta13P101C08P067G101F1_067.ab1   195 
  254  C BE518003Ta13P101C08P067G101R1_067.ab1   435 
  270    BE518003Ta13P101C08P067G101F1_067.ab1   221 
  274  C BE518003Ta13P101C08P067G101R1_067.ab1   415 
  282    BE518003Ta13P101C08P067G101F1_067.ab1   233 
  290  C BE518003Ta13P101C08P067G101R1_067.ab1   399 
  302    BE518003Ta13P101C08P067G101F1_067.ab1   253 
  306  C BE518003Ta13P101C08P067G101R1_067.ab1   383 
  328    BE518003Ta13P101C08P067G101F1_067.ab1   279 
  332  C BE518003Ta13P101C08P067G101R1_067.ab1   357 
  430    BE518003Ta13P101C08P067G101F1_067.ab1   381 
  434  C BE518003Ta13P101C08P067G101R1_067.ab1   255 
  438    BE518003Ta13P101C08P067G101F1_067.ab1   389 
  442  C BE518003Ta13P101C08P067G101R1_067.ab1   247 
  454    BE518003Ta13P101C08P067G101F1_067.ab1   405 
  458  C BE518003Ta13P101C08P067G101R1_067.ab1   231 
  474    BE518003Ta13P101C08P067G101F1_067.ab1   425 
  487  C BE518003Ta13P101C08P067G101R1_067.ab1   202 
  512    BE518003Ta13P101C08P067G101F1_067.ab1   463 
  521  C BE518003Ta13P101C08P067G101R1_067.ab1   168 
  542    BE518003Ta13P101C08P067G101F1_067.ab1   493 
  546  C BE518003Ta13P101C08P067G101R1_067.ab1   143 
  616    BE518003Ta13P101C08P067G101F1_067.ab1   567 
  620  C BE518003Ta13P101C08P067G101R1_067.ab1    69 
  677    BE518003Ta13P101C08P067G101F1_067.ab1   628 
Contig length: old 706, new 706

Contig length: old 706, new 707
New start: 0 
S Change at: 55; seg lengths: entry 1, contig 1
I Change at: 70; seg lengths: entry 1, contig 0
S Change at: 225; seg lengths: entry 1, contig 1
S Change at: 385; seg lengths: entry 1, contig 1
S Change at: 682; seg lengths: entry 1, contig 1