No. words: 1272; after pruning: 1246


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.1 (1,1:604)  527  2.81 0.33 0.33  BE518003Ta14P067G04P101E081F2_004.ab1        2   605 (22)  C BE518003Ta14P067G04P101E081R2_004.ab1   (41)   604     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE518003Ta14P067G04P101E081R2_004.ab1   645 
   82    BE518003Ta14P067G04P101E081F2_004.ab1    40 
   98  C BE518003Ta14P067G04P101E081R2_004.ab1   548 
  194    BE518003Ta14P067G04P101E081F2_004.ab1   153 
  198  C BE518003Ta14P067G04P101E081R2_004.ab1   448 
  206    BE518003Ta14P067G04P101E081F2_004.ab1   165 
  217  C BE518003Ta14P067G04P101E081R2_004.ab1   429 
  229    BE518003Ta14P067G04P101E081F2_004.ab1   188 
  241  C BE518003Ta14P067G04P101E081R2_004.ab1   405 
  245    BE518003Ta14P067G04P101E081F2_004.ab1   204 
  253  C BE518003Ta14P067G04P101E081R2_004.ab1   393 
  257    BE518003Ta14P067G04P101E081F2_004.ab1   216 
  265  C BE518003Ta14P067G04P101E081R2_004.ab1   381 
  273    BE518003Ta14P067G04P101E081F2_004.ab1   232 
  277  C BE518003Ta14P067G04P101E081R2_004.ab1   369 
  285    BE518003Ta14P067G04P101E081F2_004.ab1   244 
  293  C BE518003Ta14P067G04P101E081R2_004.ab1   353 
  325    BE518003Ta14P067G04P101E081F2_004.ab1   284 
  329  C BE518003Ta14P067G04P101E081R2_004.ab1   317 
  423    BE518003Ta14P067G04P101E081F2_004.ab1   382 
  427  C BE518003Ta14P067G04P101E081R2_004.ab1   219 
  435    BE518003Ta14P067G04P101E081F2_004.ab1   394 
  443  C BE518003Ta14P067G04P101E081R2_004.ab1   203 
  510    BE518003Ta14P067G04P101E081F2_004.ab1   469 
  518  C BE518003Ta14P067G04P101E081R2_004.ab1   128 
  641    BE518003Ta14P067G04P101E081F2_004.ab1   601 
Contig length: old 667, new 667

Contig length: old 667, new 667
New start: 0 
S Change at: 308; seg lengths: entry 1, contig 1
S Change at: 403; seg lengths: entry 1, contig 1