No. words: 1273; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.4 (1,1:595)  579  0.00 0.00 0.17  BE518003Ta16P067G04P101E081F2_002.ab1        1   594 (41)  C BE518003Ta16P067G04P101E081R2_002.ab1   (43)   595     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE518003Ta16P067G04P101E081R2_002.ab1   638 
   63    BE518003Ta16P067G04P101E081F2_002.ab1    20 
   67  C BE518003Ta16P067G04P101E081R2_002.ab1   572 
   91    BE518003Ta16P067G04P101E081F2_002.ab1    48 
   99  C BE518003Ta16P067G04P101E081R2_002.ab1   540 
  111    BE518003Ta16P067G04P101E081F2_002.ab1    68 
  115  C BE518003Ta16P067G04P101E081R2_002.ab1   524 
  123    BE518003Ta16P067G04P101E081F2_002.ab1    80 
  143  C BE518003Ta16P067G04P101E081R2_002.ab1   496 
  147    BE518003Ta16P067G04P101E081F2_002.ab1   104 
  151  C BE518003Ta16P067G04P101E081R2_002.ab1   488 
  155    BE518003Ta16P067G04P101E081F2_002.ab1   112 
  167  C BE518003Ta16P067G04P101E081R2_002.ab1   472 
  191    BE518003Ta16P067G04P101E081F2_002.ab1   148 
  215  C BE518003Ta16P067G04P101E081R2_002.ab1   424 
  223    BE518003Ta16P067G04P101E081F2_002.ab1   180 
  255  C BE518003Ta16P067G04P101E081R2_002.ab1   384 
  259    BE518003Ta16P067G04P101E081F2_002.ab1   216 
  267  C BE518003Ta16P067G04P101E081R2_002.ab1   372 
  271    BE518003Ta16P067G04P101E081F2_002.ab1   228 
  295  C BE518003Ta16P067G04P101E081R2_002.ab1   344 
  307    BE518003Ta16P067G04P101E081F2_002.ab1   264 
  315  C BE518003Ta16P067G04P101E081R2_002.ab1   324 
  323    BE518003Ta16P067G04P101E081F2_002.ab1   280 
  335  C BE518003Ta16P067G04P101E081R2_002.ab1   304 
  343    BE518003Ta16P067G04P101E081F2_002.ab1   300 
  351  C BE518003Ta16P067G04P101E081R2_002.ab1   288 
  371    BE518003Ta16P067G04P101E081F2_002.ab1   328 
  379  C BE518003Ta16P067G04P101E081R2_002.ab1   260 
  383    BE518003Ta16P067G04P101E081F2_002.ab1   340 
  411  C BE518003Ta16P067G04P101E081R2_002.ab1   228 
  419    BE518003Ta16P067G04P101E081F2_002.ab1   376 
  431  C BE518003Ta16P067G04P101E081R2_002.ab1   208 
  435    BE518003Ta16P067G04P101E081F2_002.ab1   392 
  439  C BE518003Ta16P067G04P101E081R2_002.ab1   200 
  443    BE518003Ta16P067G04P101E081F2_002.ab1   400 
  447  C BE518003Ta16P067G04P101E081R2_002.ab1   192 
  459    BE518003Ta16P067G04P101E081F2_002.ab1   416 
  463  C BE518003Ta16P067G04P101E081R2_002.ab1   176 
  467    BE518003Ta16P067G04P101E081F2_002.ab1   424 
  471  C BE518003Ta16P067G04P101E081R2_002.ab1   168 
  475    BE518003Ta16P067G04P101E081F2_002.ab1   432 
  479  C BE518003Ta16P067G04P101E081R2_002.ab1   160 
  495    BE518003Ta16P067G04P101E081F2_002.ab1   452 
  503  C BE518003Ta16P067G04P101E081R2_002.ab1   136 
  507    BE518003Ta16P067G04P101E081F2_002.ab1   464 
  547  C BE518003Ta16P067G04P101E081R2_002.ab1    92 
  559    BE518003Ta16P067G04P101E081F2_002.ab1   516 
  563  C BE518003Ta16P067G04P101E081R2_002.ab1    76 
  567    BE518003Ta16P067G04P101E081F2_002.ab1   524 
  599  C BE518003Ta16P067G04P101E081R2_002.ab1    40 
  619    BE518003Ta16P067G04P101E081F2_002.ab1   576 
Contig length: old 677, new 678

Contig length: old 678, new 678
New start: 0