No. words: 1287; after pruning: 1261


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.0 (1,1:609)  593  0.00 0.00 0.16  BE518003Ta20P067G04P101E081F1_062.ab1        1   608 (31)  C BE518003Ta20P067G04P101E081R1_062.ab1   (39)   609     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BE518003Ta20P067G04P101E081R1_062.ab1   648 
   87    BE518003Ta20P067G04P101E081F1_062.ab1    48 
   95  C BE518003Ta20P067G04P101E081R1_062.ab1   554 
  391    BE518003Ta20P067G04P101E081F1_062.ab1   352 
  411  C BE518003Ta20P067G04P101E081R1_062.ab1   238 
  431    BE518003Ta20P067G04P101E081F1_062.ab1   392 
  439  C BE518003Ta20P067G04P101E081R1_062.ab1   210 
  443    BE518003Ta20P067G04P101E081F1_062.ab1   404 
  451  C BE518003Ta20P067G04P101E081R1_062.ab1   198 
  487    BE518003Ta20P067G04P101E081F1_062.ab1   448 
  495  C BE518003Ta20P067G04P101E081R1_062.ab1   154 
  531    BE518003Ta20P067G04P101E081F1_062.ab1   492 
  535  C BE518003Ta20P067G04P101E081R1_062.ab1   114 
  539    BE518003Ta20P067G04P101E081F1_062.ab1   500 
  547  C BE518003Ta20P067G04P101E081R1_062.ab1   102 
  563    BE518003Ta20P067G04P101E081F1_062.ab1   524 
  567  C BE518003Ta20P067G04P101E081R1_062.ab1    82 
  575    BE518003Ta20P067G04P101E081F1_062.ab1   536 
  583  C BE518003Ta20P067G04P101E081R1_062.ab1    66 
  587    BE518003Ta20P067G04P101E081F1_062.ab1   548 
Contig length: old 677, new 678

Contig length: old 678, new 678
New start: 0