No. words: 1293; after pruning: 1267


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.6 (1,1:596)  575  0.34 0.00 0.17  BE518003Ta20P067G04P101E081F2_030.ab1        1   595 (55)  C BE518003Ta20P067G04P101E081R2_030.ab1   (47)   596     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE518003Ta20P067G04P101E081R2_030.ab1   643 
  216    BE518003Ta20P067G04P101E081F2_030.ab1   169 
  220  C BE518003Ta20P067G04P101E081R2_030.ab1   424 
  236    BE518003Ta20P067G04P101E081F2_030.ab1   189 
  244  C BE518003Ta20P067G04P101E081R2_030.ab1   400 
  252    BE518003Ta20P067G04P101E081F2_030.ab1   205 
  256  C BE518003Ta20P067G04P101E081R2_030.ab1   388 
  264    BE518003Ta20P067G04P101E081F2_030.ab1   217 
  276  C BE518003Ta20P067G04P101E081R2_030.ab1   368 
  280    BE518003Ta20P067G04P101E081F2_030.ab1   233 
  284  C BE518003Ta20P067G04P101E081R2_030.ab1   360 
  292    BE518003Ta20P067G04P101E081F2_030.ab1   245 
  300  C BE518003Ta20P067G04P101E081R2_030.ab1   344 
  328    BE518003Ta20P067G04P101E081F2_030.ab1   281 
  388  C BE518003Ta20P067G04P101E081R2_030.ab1   256 
  392    BE518003Ta20P067G04P101E081F2_030.ab1   345 
  420  C BE518003Ta20P067G04P101E081R2_030.ab1   224 
  424    BE518003Ta20P067G04P101E081F2_030.ab1   377 
  452  C BE518003Ta20P067G04P101E081R2_030.ab1   192 
  460    BE518003Ta20P067G04P101E081F2_030.ab1   413 
  468  C BE518003Ta20P067G04P101E081R2_030.ab1   176 
  472    BE518003Ta20P067G04P101E081F2_030.ab1   425 
  484  C BE518003Ta20P067G04P101E081R2_030.ab1   160 
  488    BE518003Ta20P067G04P101E081F2_030.ab1   441 
Contig length: old 696, new 697

Contig length: old 697, new 697
New start: 0