No. words: 1140; after pruning: 1114


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 1.1 (1,1:568)  346  9.16 0.00 0.00  BE518003Ta20P101C08P067G101F1_094.ab1        1   491 (2)  C BE518003Ta20P101C08P067G101R1_094.ab1   (78)   569    79 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1  C BE518003Ta20P101C08P067G101R1_094.ab1   647 
   83    BE518003Ta20P101C08P067G101F1_094.ab1     5 
   87  C BE518003Ta20P101C08P067G101R1_094.ab1   561 
   91    BE518003Ta20P101C08P067G101F1_094.ab1    13 
  119  C BE518003Ta20P101C08P067G101R1_094.ab1   529 
  131    BE518003Ta20P101C08P067G101F1_094.ab1    53 
  135  C BE518003Ta20P101C08P067G101R1_094.ab1   513 
  271    BE518003Ta20P101C08P067G101F1_094.ab1   193 
  275  C BE518003Ta20P101C08P067G101R1_094.ab1   373 
  456    BE518003Ta20P101C08P067G101F1_094.ab1   378 
  460  C BE518003Ta20P101C08P067G101R1_094.ab1   188 
Contig length: old 647, new 647

Contig length: old 647, new 647
New start: 0 
S Change at: 482; seg lengths: entry 1, contig 1
S Change at: 518; seg lengths: entry 1, contig 1