No. words: 1278; after pruning: 1252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.7 (1,1:608)  557  1.16 0.17 0.50  BE518003Ta23P067G04P101E081F2_025.ab1        3   608 (25)  C BE518003Ta23P067G04P101E081R2_025.ab1   (39)   606     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE518003Ta23P067G04P101E081R2_025.ab1   645 
   43    BE518003Ta23P067G04P101E081F2_025.ab1     6 
   47  C BE518003Ta23P067G04P101E081R2_025.ab1   599 
   90    BE518003Ta23P067G04P101E081F2_025.ab1    52 
   94  C BE518003Ta23P067G04P101E081R2_025.ab1   552 
  158    BE518003Ta23P067G04P101E081F2_025.ab1   121 
  162  C BE518003Ta23P067G04P101E081R2_025.ab1   484 
  210    BE518003Ta23P067G04P101E081F2_025.ab1   173 
  214  C BE518003Ta23P067G04P101E081R2_025.ab1   432 
  226    BE518003Ta23P067G04P101E081F2_025.ab1   189 
  242  C BE518003Ta23P067G04P101E081R2_025.ab1   404 
  246    BE518003Ta23P067G04P101E081F2_025.ab1   209 
  250  C BE518003Ta23P067G04P101E081R2_025.ab1   396 
  254    BE518003Ta23P067G04P101E081F2_025.ab1   217 
  262  C BE518003Ta23P067G04P101E081R2_025.ab1   384 
  270    BE518003Ta23P067G04P101E081F2_025.ab1   233 
  278  C BE518003Ta23P067G04P101E081R2_025.ab1   368 
  290    BE518003Ta23P067G04P101E081F2_025.ab1   253 
  294  C BE518003Ta23P067G04P101E081R2_025.ab1   352 
  302    BE518003Ta23P067G04P101E081F2_025.ab1   265 
  306  C BE518003Ta23P067G04P101E081R2_025.ab1   340 
  322    BE518003Ta23P067G04P101E081F2_025.ab1   285 
  326  C BE518003Ta23P067G04P101E081R2_025.ab1   320 
  422    BE518003Ta23P067G04P101E081F2_025.ab1   385 
  426  C BE518003Ta23P067G04P101E081R2_025.ab1   220 
  441    BE518003Ta23P067G04P101E081F2_025.ab1   404 
  445  C BE518003Ta23P067G04P101E081R2_025.ab1   201 
  568    BE518003Ta23P067G04P101E081F2_025.ab1   531 
  572  C BE518003Ta23P067G04P101E081R2_025.ab1    74 
  638    BE518003Ta23P067G04P101E081F2_025.ab1   603 
Contig length: old 669, new 668

Contig length: old 668, new 668
New start: 0