No. words: 1049; after pruning: 1023


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:393)  365  1.78 0.00 0.00  BE518003Ta23P067G04P108H051F1_089.ab1        1   394 (107)  C BE518003Ta23P067G04P108H051R1_089.ab1   (154)   394     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  188 nodes

 96 str. conn. components

Path
    1  C BE518003Ta23P067G04P108H051R1_089.ab1   548 
  166    BE518003Ta23P067G04P108H051F1_089.ab1    12 
  174  C BE518003Ta23P067G04P108H051R1_089.ab1   375 
  194    BE518003Ta23P067G04P108H051F1_089.ab1    40 
  198  C BE518003Ta23P067G04P108H051R1_089.ab1   351 
  238    BE518003Ta23P067G04P108H051F1_089.ab1    84 
  246  C BE518003Ta23P067G04P108H051R1_089.ab1   303 
  274    BE518003Ta23P067G04P108H051F1_089.ab1   120 
  286  C BE518003Ta23P067G04P108H051R1_089.ab1   263 
  306    BE518003Ta23P067G04P108H051F1_089.ab1   152 
  310  C BE518003Ta23P067G04P108H051R1_089.ab1   239 
  322    BE518003Ta23P067G04P108H051F1_089.ab1   168 
  326  C BE518003Ta23P067G04P108H051R1_089.ab1   223 
  338    BE518003Ta23P067G04P108H051F1_089.ab1   184 
  342  C BE518003Ta23P067G04P108H051R1_089.ab1   207 
  350    BE518003Ta23P067G04P108H051F1_089.ab1   196 
  366  C BE518003Ta23P067G04P108H051R1_089.ab1   183 
  370    BE518003Ta23P067G04P108H051F1_089.ab1   216 
  374  C BE518003Ta23P067G04P108H051R1_089.ab1   175 
  378    BE518003Ta23P067G04P108H051F1_089.ab1   224 
  398  C BE518003Ta23P067G04P108H051R1_089.ab1   151 
  406    BE518003Ta23P067G04P108H051F1_089.ab1   252 
  430  C BE518003Ta23P067G04P108H051R1_089.ab1   119 
  438    BE518003Ta23P067G04P108H051F1_089.ab1   284 
  454  C BE518003Ta23P067G04P108H051R1_089.ab1    95 
  458    BE518003Ta23P067G04P108H051F1_089.ab1   304 
  470  C BE518003Ta23P067G04P108H051R1_089.ab1    79 
  482    BE518003Ta23P067G04P108H051F1_089.ab1   328 
Contig length: old 655, new 655

Contig length: old 655, new 655
New start: 0