No. words: 1296; after pruning: 1270


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.4 (1,1:605)  585  0.00 0.17 0.17  BE518003Td01P067G04P101E081F1_047.ab1        1   604 (31)  C BE518003Td01P067G04P101E081R1_047.ab1   (55)   606     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE518003Td01P067G04P101E081R1_047.ab1   661 
   78    BE518003Td01P067G04P101E081F1_047.ab1    22 
   82  C BE518003Td01P067G04P101E081R1_047.ab1   580 
  102    BE518003Td01P067G04P101E081F1_047.ab1    46 
  110  C BE518003Td01P067G04P101E081R1_047.ab1   552 
  134    BE518003Td01P067G04P101E081F1_047.ab1    78 
  142  C BE518003Td01P067G04P101E081R1_047.ab1   520 
  186    BE518003Td01P067G04P101E081F1_047.ab1   130 
  194  C BE518003Td01P067G04P101E081R1_047.ab1   468 
  218    BE518003Td01P067G04P101E081F1_047.ab1   162 
  222  C BE518003Td01P067G04P101E081R1_047.ab1   440 
  230    BE518003Td01P067G04P101E081F1_047.ab1   174 
  234  C BE518003Td01P067G04P101E081R1_047.ab1   428 
  242    BE518003Td01P067G04P101E081F1_047.ab1   186 
  254  C BE518003Td01P067G04P101E081R1_047.ab1   408 
  270    BE518003Td01P067G04P101E081F1_047.ab1   214 
  302  C BE518003Td01P067G04P101E081R1_047.ab1   360 
  318    BE518003Td01P067G04P101E081F1_047.ab1   262 
  466  C BE518003Td01P067G04P101E081R1_047.ab1   196 
  474    BE518003Td01P067G04P101E081F1_047.ab1   418 
  506  C BE518003Td01P067G04P101E081R1_047.ab1   156 
  510    BE518003Td01P067G04P101E081F1_047.ab1   454 
  522  C BE518003Td01P067G04P101E081R1_047.ab1   140 
  530    BE518003Td01P067G04P101E081F1_047.ab1   474 
  566  C BE518003Td01P067G04P101E081R1_047.ab1    96 
  574    BE518003Td01P067G04P101E081F1_047.ab1   518 
Contig length: old 690, new 691

Contig length: old 691, new 691
New start: 0