No. words: 1205; after pruning: 1179


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.9 (1,1:555)  533  0.36 0.00 0.18  BE518003Td02P067G04P108H051F1_080.ab1        1   555 (52)  C BE518003Td02P067G04P108H051R1_080.ab1   (43)   555     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE518003Td02P067G04P108H051R1_080.ab1   598 
  167    BE518003Td02P067G04P108H051F1_080.ab1   124 
  175  C BE518003Td02P067G04P108H051R1_080.ab1   424 
  383    BE518003Td02P067G04P108H051F1_080.ab1   340 
  455  C BE518003Td02P067G04P108H051R1_080.ab1   144 
  459    BE518003Td02P067G04P108H051F1_080.ab1   416 
  467  C BE518003Td02P067G04P108H051R1_080.ab1   132 
  483    BE518003Td02P067G04P108H051F1_080.ab1   440 
  519  C BE518003Td02P067G04P108H051R1_080.ab1    80 
  523    BE518003Td02P067G04P108H051F1_080.ab1   480 
Contig length: old 649, new 650

Contig length: old 650, new 650
New start: 0