No. words: 1296; after pruning: 1270


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.6 (1,1:616)  600  0.00 0.00 0.16  BE518003Td05P067G04P101E081F1_043.ab1        1   615 (33)  C BE518003Td05P067G04P101E081R1_043.ab1   (32)   616     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE518003Td05P067G04P101E081R1_043.ab1   648 
   68    BE518003Td05P067G04P101E081F1_043.ab1    36 
   72  C BE518003Td05P067G04P101E081R1_043.ab1   577 
  276    BE518003Td05P067G04P101E081F1_043.ab1   244 
  296  C BE518003Td05P067G04P101E081R1_043.ab1   353 
  324    BE518003Td05P067G04P101E081F1_043.ab1   292 
  328  C BE518003Td05P067G04P101E081R1_043.ab1   321 
  336    BE518003Td05P067G04P101E081F1_043.ab1   304 
  380  C BE518003Td05P067G04P101E081R1_043.ab1   269 
  400    BE518003Td05P067G04P101E081F1_043.ab1   368 
  436  C BE518003Td05P067G04P101E081R1_043.ab1   213 
  444    BE518003Td05P067G04P101E081F1_043.ab1   412 
  452  C BE518003Td05P067G04P101E081R1_043.ab1   197 
  476    BE518003Td05P067G04P101E081F1_043.ab1   444 
  492  C BE518003Td05P067G04P101E081R1_043.ab1   157 
  496    BE518003Td05P067G04P101E081F1_043.ab1   464 
  504  C BE518003Td05P067G04P101E081R1_043.ab1   145 
  516    BE518003Td05P067G04P101E081F1_043.ab1   484 
  548  C BE518003Td05P067G04P101E081R1_043.ab1   101 
  552    BE518003Td05P067G04P101E081F1_043.ab1   520 
  556  C BE518003Td05P067G04P101E081R1_043.ab1    93 
  564    BE518003Td05P067G04P101E081F1_043.ab1   532 
Contig length: old 679, new 680

Contig length: old 680, new 680
New start: 0