No. words: 1322; after pruning: 1296


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:584)  564  0.51 0.00 0.00  BE518003Td05P101C08P067G101F1_075.ab1        1   585 (68)  C BE518003Td05P101C08P067G101R1_075.ab1   (84)   585     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE518003Td05P101C08P067G101R1_075.ab1   669 
  430    BE518003Td05P101C08P067G101F1_075.ab1   346 
  434  C BE518003Td05P101C08P067G101R1_075.ab1   236 
  608    BE518003Td05P101C08P067G101F1_075.ab1   524 
  612  C BE518003Td05P101C08P067G101R1_075.ab1    58 
  628    BE518003Td05P101C08P067G101F1_075.ab1   544 
  632  C BE518003Td05P101C08P067G101R1_075.ab1    38 
  644    BE518003Td05P101C08P067G101F1_075.ab1   560 
  656  C BE518003Td05P101C08P067G101R1_075.ab1    14 
  660    BE518003Td05P101C08P067G101F1_075.ab1   576 
Contig length: old 737, new 737

Contig length: old 737, new 737
New start: 0