No. words: 1202; after pruning: 1176


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.3 (1,1:555)  543  0.00 0.00 0.00  BE518003Td06P067G04P108H051F1_076.ab1        1   555 (52)  C BE518003Td06P067G04P108H051R1_076.ab1   (39)   556     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE518003Td06P067G04P108H051R1_076.ab1   595 
   63    BE518003Td06P067G04P108H051F1_076.ab1    24 
   75  C BE518003Td06P067G04P108H051R1_076.ab1   521 
  247    BE518003Td06P067G04P108H051F1_076.ab1   208 
  379  C BE518003Td06P067G04P108H051R1_076.ab1   217 
  479    BE518003Td06P067G04P108H051F1_076.ab1   440 
  487  C BE518003Td06P067G04P108H051R1_076.ab1   109 
  491    BE518003Td06P067G04P108H051F1_076.ab1   452 
  499  C BE518003Td06P067G04P108H051R1_076.ab1    97 
  515    BE518003Td06P067G04P108H051F1_076.ab1   476 
  551  C BE518003Td06P067G04P108H051R1_076.ab1    45 
  571    BE518003Td06P067G04P108H051F1_076.ab1   532 
Contig length: old 646, new 646

Contig length: old 646, new 646
New start: 0