No. words: 1317; after pruning: 1291


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:597)  552  1.17 0.17 0.33  BE518003Td09P101C08P067G101F1_071.ab1        1   599 (49)  C BE518003Td09P101C08P067G101R1_071.ab1   (71)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BE518003Td09P101C08P067G101R1_071.ab1   669 
  111    BE518003Td09P101C08P067G101F1_071.ab1    39 
  115  C BE518003Td09P101C08P067G101R1_071.ab1   555 
  157    BE518003Td09P101C08P067G101F1_071.ab1    85 
  161  C BE518003Td09P101C08P067G101R1_071.ab1   509 
  193    BE518003Td09P101C08P067G101F1_071.ab1   122 
  197  C BE518003Td09P101C08P067G101R1_071.ab1   473 
  218    BE518003Td09P101C08P067G101F1_071.ab1   147 
  222  C BE518003Td09P101C08P067G101R1_071.ab1   448 
  254    BE518003Td09P101C08P067G101F1_071.ab1   183 
  258  C BE518003Td09P101C08P067G101R1_071.ab1   412 
  278    BE518003Td09P101C08P067G101F1_071.ab1   207 
  318  C BE518003Td09P101C08P067G101R1_071.ab1   352 
  338    BE518003Td09P101C08P067G101F1_071.ab1   267 
  346  C BE518003Td09P101C08P067G101R1_071.ab1   324 
  394    BE518003Td09P101C08P067G101F1_071.ab1   323 
  398  C BE518003Td09P101C08P067G101R1_071.ab1   272 
  406    BE518003Td09P101C08P067G101F1_071.ab1   335 
  414  C BE518003Td09P101C08P067G101R1_071.ab1   256 
  426    BE518003Td09P101C08P067G101F1_071.ab1   355 
  438  C BE518003Td09P101C08P067G101R1_071.ab1   232 
  442    BE518003Td09P101C08P067G101F1_071.ab1   371 
  454  C BE518003Td09P101C08P067G101R1_071.ab1   216 
  458    BE518003Td09P101C08P067G101F1_071.ab1   387 
  462  C BE518003Td09P101C08P067G101R1_071.ab1   208 
  482    BE518003Td09P101C08P067G101F1_071.ab1   411 
  494  C BE518003Td09P101C08P067G101R1_071.ab1   176 
  498    BE518003Td09P101C08P067G101F1_071.ab1   427 
  502  C BE518003Td09P101C08P067G101R1_071.ab1   168 
  514    BE518003Td09P101C08P067G101F1_071.ab1   443 
  518  C BE518003Td09P101C08P067G101R1_071.ab1   152 
  522    BE518003Td09P101C08P067G101F1_071.ab1   451 
  538  C BE518003Td09P101C08P067G101R1_071.ab1   132 
  546    BE518003Td09P101C08P067G101F1_071.ab1   475 
  558  C BE518003Td09P101C08P067G101R1_071.ab1   112 
  586    BE518003Td09P101C08P067G101F1_071.ab1   515 
  598  C BE518003Td09P101C08P067G101R1_071.ab1    72 
  614    BE518003Td09P101C08P067G101F1_071.ab1   543 
  622  C BE518003Td09P101C08P067G101R1_071.ab1    48 
  630    BE518003Td09P101C08P067G101F1_071.ab1   559 
  658  C BE518003Td09P101C08P067G101R1_071.ab1    13 
  666    BE518003Td09P101C08P067G101F1_071.ab1   595 
Contig length: old 719, new 719

Contig length: old 719, new 719
New start: 0