No. words: 1004; after pruning: 978


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 2.5 (1,1:830)  159  0.00 0.58 0.58  BE518003Tu01P067G04P067G101F1_080.ab1      318   489 (0)  C BE518003Tu01P067G04P067G101R1_080.ab1   (1)   514   343 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  84 nodes

 44 str. conn. components

Path
    1    BE518003Tu01P067G04P067G101F1_080.ab1     1 
  429  C BE518003Tu01P067G04P067G101R1_080.ab1   404 
  445    BE518003Tu01P067G04P067G101F1_080.ab1   445 
  449  C BE518003Tu01P067G04P067G101R1_080.ab1   384 
Contig length: old 831, new 832

Contig length: old 832, new 832
New start: 0