No. words: 1247; after pruning: 1221


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 10.5 (1,1:573)  543  0.00 0.00 0.00  BE518446At02P026B09P026F111F1_021.ab1        3   571 (57)  C BE518446At02P026B09P026F111R1_021.ab1   (47)   572     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C BE518446At02P026B09P026F111R1_021.ab1   619 
   64    BE518446At02P026B09P026F111F1_021.ab1    19 
   68  C BE518446At02P026B09P026F111R1_021.ab1   552 
   72    BE518446At02P026B09P026F111F1_021.ab1    27 
   88  C BE518446At02P026B09P026F111R1_021.ab1   532 
   96    BE518446At02P026B09P026F111F1_021.ab1    51 
  124  C BE518446At02P026B09P026F111R1_021.ab1   496 
  128    BE518446At02P026B09P026F111F1_021.ab1    83 
  132  C BE518446At02P026B09P026F111R1_021.ab1   488 
  140    BE518446At02P026B09P026F111F1_021.ab1    95 
  144  C BE518446At02P026B09P026F111R1_021.ab1   476 
  156    BE518446At02P026B09P026F111F1_021.ab1   111 
  172  C BE518446At02P026B09P026F111R1_021.ab1   448 
  176    BE518446At02P026B09P026F111F1_021.ab1   131 
  184  C BE518446At02P026B09P026F111R1_021.ab1   436 
  192    BE518446At02P026B09P026F111F1_021.ab1   147 
  240  C BE518446At02P026B09P026F111R1_021.ab1   380 
  516    BE518446At02P026B09P026F111F1_021.ab1   471 
  524  C BE518446At02P026B09P026F111R1_021.ab1    96 
  572    BE518446At02P026B09P026F111F1_021.ab1   527 
  580  C BE518446At02P026B09P026F111R1_021.ab1    40 
  584    BE518446At02P026B09P026F111F1_021.ab1   539 
  600  C BE518446At02P026B09P026F111R1_021.ab1    20 
  604    BE518446At02P026B09P026F111F1_021.ab1   559 
Contig length: old 673, new 673

Contig length: old 673, new 673
New start: 0