No. words: 1450; after pruning: 1424


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.9 (1,1:567)  528  0.00 0.18 0.53  BE518446Ld01P026B09P026F111F1_019.ab1        1   570 (172)  C BE518446Ld01P026B09P026F111R1_019.ab1   (140)   568     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BE518446Ld01P026B09P026F111R1_019.ab1   708 
  231    BE518446Ld01P026B09P026F111F1_019.ab1    90 
  235  C BE518446Ld01P026B09P026F111R1_019.ab1   474 
  303    BE518446Ld01P026B09P026F111F1_019.ab1   162 
  323  C BE518446Ld01P026B09P026F111R1_019.ab1   386 
  539    BE518446Ld01P026B09P026F111F1_019.ab1   398 
  575  C BE518446Ld01P026B09P026F111R1_019.ab1   134 
  595    BE518446Ld01P026B09P026F111F1_019.ab1   454 
  607  C BE518446Ld01P026B09P026F111R1_019.ab1   102 
  651    BE518446Ld01P026B09P026F111F1_019.ab1   510 
Contig length: old 882, new 883

Contig length: old 883, new 883
New start: 0